8D9H · B / C

rna_01647__8D9H_1_B-C

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_01647__8D9H_1_B-C
RNA-Solo ID
rna_01647
Split identity
rna_01647
Source structure
8D9H_1_C-D
Length
56 nt
Canonical chains
B, C
Partition
train

MD-derived metadata

15.87 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
29.92 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GACUUAAUGUCACGGUACCCAAUUUUCUGCCCCGGAUCCGGGGCAGAAAAUUGGGU
Canonical chainPDB chainlabel_asym_idauth_asym_id
BBBC
CCCD

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

29db2604895a8ca0622bcd0f172f0d010c958ae968dc6f673bef6b8b36f207b4

rna.gro · SHA-256

3a78bc87250209bf50c791627958c5afa904e74390e018b9c68b793539be6737

rna.pdb · SHA-256

85ef8fa7d7447c049b0e18e77d6db22ff9f3a69d4c4abf44e7d06e0f04cf622c