5M3J · D / E

rna_01785__5M3J_1_D-E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01785__5M3J_1_D-E
RNA-Solo ID: rna_01785
Split identity: rna_01785
Source structure: 5M3J_1_V-R
Length: 28 nt
Canonical chains: D, E
Partition: train

MD-derived metadata

6.08 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 14.99 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UAUACCUCUGCUUCAGUAGUAACAAGAG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	R
E	E	E	V

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

64c4755689dba8c1f934a055e02b74bfc6927d7e175713ee353cdc76f2c9221a

rna.gro · SHA-256

3d390f5afd4d06460c503f335ee5d7b7a318f221fe81869b183e20f5deef2d90

rna.pdb · SHA-256

9b0913150c58eddb13e20ef3d6189311cbbeb7eed065ce0c218ecbe03651eade