2V3C · E

rna_01874__2V3C_1_E

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_01874__2V3C_1_E
RNA-Solo ID
rna_01874
Split identity
rna_01874
Source structure
2V3C_1_M
Length
96 nt
Canonical chains
E
Partition
train

MD-derived metadata

3.91 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
24.32 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCGGUGGGGGAGCAUCUCCUGUAGGGGAGAUGUAACCCCCUUUACCUGCCGAACCCCGCCAGGCCCGGAAGGGAGCAACGGUAGGCAGGACGUCG
Canonical chainPDB chainlabel_asym_idauth_asym_id
EEEM

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

7a675653b471e76c1856b376ca84074b2294ec413e9b301a40759d599e042043

rna.gro · SHA-256

382e06f4f3c31df37686b3611e8250ae5a0067b57fa46094bbd6bf47dac0e892

rna.pdb · SHA-256

d228745d6b0e5956a90ce936adae1b65aedcac1db0ebb14763c107bbc5618d98