1KD3 · A / B

rna_01917__1KD3_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01917__1KD3_1_A-B
RNA-Solo ID: rna_01917
Split identity: rna_01917
Source structure: 1KD3_1_A-B
Length: 22 nt
Canonical chains: A, B
Partition: train

MD-derived metadata

2.21 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 12.43 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUCACAGCCCGGUCACAGCCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

40a747e321853911649ef6921a511dc4823f43b98b4d18b946733d7901932623

rna.gro · SHA-256

1330b9d249b125bb0a20cff18cf142a9402b2833f657346473b450ca6639cf35

rna.pdb · SHA-256

5fbd946458365cff4bddf7502bef54278d2d30e8de9c35c01fb13d382d9cacc5