1KD5 · A / B

rna_01917__1KD5_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_01917__1KD5_1_A-B
RNA-Solo ID: rna_01917
Split identity: rna_01917
Source structure: 1KD5_1_A-B
Length: 22 nt
Canonical chains: A, B
Partition: train

MD-derived metadata

2.71 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 12.64 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGUCACAGCCCGGUCACAGCCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

1ccac761af4dc9359f8b203eb98f80d5e074840aa24615bc7b751f5f7e8284a9

rna.gro · SHA-256

5f6a81df34bce6661d3d3a6380a2827735e683b1d73c2be6a6ab959f41adf41d

rna.pdb · SHA-256

804d6a656a052530f8cdcb11fe0ae48580cc9cbaec0926856a8a6a0a4f60bcdb