8P5D · B

rna_02000__8P5D_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02000__8P5D_1_B
RNA-Solo ID: rna_02000
Split identity: rna_02000
Source structure: 8P5D_1_L70
Length: 119 nt
Canonical chains: B
Partition: train

MD-derived metadata

5.11 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.82 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AGUUACGGCCAUAUCUACUGAAAAACACCGGAUCCCGUCCGAUCUCCGAAGUUAAGCCAAUAAGAGCCAUGCGAGUAUUAAGGUGGGCGACUACUUGAGAAAGCGUGGUGCUGUAGUUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	A	B	L70

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_02000__8P5D_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

cabb4d788ea64ffca6deade66cef6146b208c38ad450929dd44d06a382fdd020

rna.gro · SHA-256

3f0389b92c6d59c54a83a5df430d264dc4568f8efbcf2111ac8fb84107f9f0af

rna.pdb · SHA-256

7678ba515ea2abe11e187c5dc4c122a764c8da824e7912a2e170f400a1b4384e