3R9W · B

rna_02003__3R9W_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02003__3R9W_1_B
RNA-Solo ID: rna_02003
Split identity: rna_02003
Source structure: 3R9W_1_B
Length: 34 nt
Canonical chains: B
Partition: train

MD-derived metadata

21.30 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 25.81 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CAACCGUAGGGGAACCUGCGGUUGGAUCACCUCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

76de2168349df2b779f46c5039efdc2062bead2da686426fc2889b1fff419c24

rna.gro · SHA-256

ffa67b39e47d8514eedadb1e95a04484d2b6192e00f4a2fb1bc769be39811513

rna.pdb · SHA-256

204b1b3c12e6a590f6d3905bb6556a419df3b25c3a08d46bd3d721da1e7e0e24