8DG7 · B / C

rna_02055__8DG7_1_B-C

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_02055__8DG7_1_B-C
RNA-Solo ID
rna_02055
Split identity
rna_02055
Source structure
8DG7_1_F-E
Length
47 nt
Canonical chains
B, C
Partition
train

MD-derived metadata

4.10 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
20.18 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GAGGUAGUAGGUUGUAUAGUACAUACUAUACAACCUACUACCUCUCU
Canonical chainPDB chainlabel_asym_idauth_asym_id
BBBE
CCCF

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

27a21c1e68ec84fb8ed3c83890827174fdc3ae1c50cd9794d26e2a37896abba5

rna.gro · SHA-256

47af43a207e9f8696ba2d04edd458d722cd641b665ff4e8553b89d24ac6edbab

rna.pdb · SHA-256

bd44f91c1415901b0e0ef4e81d5d8deb9f439d19f4478da68b51e9c08bd34a7d