8GAP · G

rna_02061__8GAP_1_G

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02061__8GAP_1_G
RNA-Solo ID: rna_02061
Split identity: rna_02061
Source structure: 8GAP_1_B
Length: 159 nt
Canonical chains: G
Partition: test_flex

MD-derived metadata

18.15 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 36.15 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AUACCCGCUUAAUUCAUUCAGAUCUGUAAUAGAACUGUCAUUCAACCCCAAAAAUCUAGUGCUGAUAUAACCUUCACCAAUUAGGUUCAAAUAAGUGGUAAUGCGGGACAAAAGACUAUCGACAUUUGAUACACUAUUUAUCAAUGGAUGUCUUAUUUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
G	G	G	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

7008166f7eb0abdd152d9708fc2928e40cd88253aea207e21c0a464604e41d48

rna.gro · SHA-256

1783777bac1956d23e6450f4c1424d3672da3944c7019b79273a46480d3d2e8c

rna.pdb · SHA-256

e3b2a870806040584f3deff0b2d9030b9a6a0a8ef9b6e4c5e47bf6948ce4003f