3RKF · D

rna_02153__3RKF_1_D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02153__3RKF_1_D
RNA-Solo ID: rna_02153
Split identity: rna_02153
Source structure: 3RKF_1_D
Length: 67 nt
Canonical chains: D
Partition: test_struct

MD-derived metadata

2.40 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 20.01 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCCAUAUAACUGCGUGGAUAUAGCACGCAGGUUUCUACCGGGCACUGUAAAUGUCCGACUAUGGUC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

72e94cef562f5bf0d2c97c89344e80d31a75360ba8137dcbf387420b31b15e48

rna.gro · SHA-256

52c7f5be7b1cbdeae22bcf5cada20ba5ec35a7071bb5fdb8e26947dc04771ab5

rna.pdb · SHA-256

1d2bbd4c0b59c35cacafdabb76c1c15cb0a9cf0c2c857b3a35bf31d14ce6e38b