5UD5 · D

rna_02159__5UD5_1_D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02159__5UD5_1_D
RNA-Solo ID: rna_02159
Split identity: rna_02159
Source structure: 5UD5_1_D
Length: 72 nt
Canonical chains: D
Partition: train

MD-derived metadata

2.80 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.80 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGAAACCUGAUCAUGUAGAUCGAAUGGACUCUAAAUCCGUUCAGCCGGGUUAGAUUCCCGGGGUUUCCGCCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

b6e9472cadb5066b829d3c3e344b78479373b1aa766f875dc4e46be2d68e5bb4

rna.gro · SHA-256

a826f307c18af422ad8d43b4829b7124bdeffad1400fe897fdb7ae2f1bfb3f74

rna.pdb · SHA-256

bd6a0d66f89f0182e2b1e4ffdf80e2753bff89bb1d89f991ed401af68350b603