5NXT · A

rna_02164__5NXT_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02164__5NXT_1_A
RNA-Solo ID: rna_02164
Split identity: rna_02164
Source structure: 5NXT_1_U
Length: 18 nt
Canonical chains: A
Partition: train

MD-derived metadata

8.47 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 16.78 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGUUCUCUACGAAGAACA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	U

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

1dd0604be26d7532354517dcbed957c31b07ce6e8dfa86c2ed6302c4472e3c51

rna.gro · SHA-256

3857049dff841e3c4ce86073de5fd4e98b09ccf1508bf65e138fb204cc27d73a

rna.pdb · SHA-256

c0a1c2d6d36f8b2a3c502666b44a8d150f14c1104e11f8b8f8a2700d1f53c4cd