3JB7 · D / E

rna_02231__3JB7_1_D-E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02231__3JB7_1_D-E
RNA-Solo ID: rna_02231
Split identity: rna_02231
Source structure: 3JB7_1_t-m
Length: 11 nt
Canonical chains: D, E
Partition: train

MD-derived metadata

1.70 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 8.91 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGGGGCCCCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	t
E	E	E	m

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

8ed0555c77328f165a204a772c7c85b99a6d0c23c1110ccd5968d8c2645ac298

rna.gro · SHA-256

4044e0eb0c3caf234f3e89fd3a26ebbc28f26555c527c148fe13e76b432146e2

rna.pdb · SHA-256

bd2080324f44400e1b32920998b3e7966e2a67ebf45a25ed4dafc9fe7e173a59