5BKN · U / AA

rna_02241__5BKN_1_AA-U

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02241__5BKN_1_AA-U
RNA-Solo ID: rna_02241
Split identity: rna_02241
Source structure: 5BKN_1_Y-n
Length: 16 nt
Canonical chains: U, AA
Partition: train

MD-derived metadata

2.12 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 11.84 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AAAAAAAAAUUUUUUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
U	U	U	Y
AA	A	AA	n

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

5aefc348c2895f316221a62c9fa03968ff3ff650008f2987ae729826627ced56

rna.gro · SHA-256

69b0983951036d385eab983fd185ca652eeec201450f7cc65d7540cc7a3b0d07

rna.pdb · SHA-256

c66a2f0ca69f2ba1c4644ae1d6116c6582b7b52b8c5eddf80ef75c6057e2d78d