5KVJ · A / B

rna_02354__5KVJ_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02354__5KVJ_1_A-B
RNA-Solo ID: rna_02354
Split identity: rna_02354
Source structure: 5KVJ_1_A-B
Length: 32 nt
Canonical chains: A, B
Partition: train

MD-derived metadata

2.03 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 15.18 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CCAUCCUCUACAGGCGCGCCUGUAGAGGAUGG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

874b77ed3e415e371d7ee19e9bffcecca60529ee4f564c7dc9017fa7398688b7

rna.gro · SHA-256

af362f93352d5f1e7e366c0f276358896f898f3ef67b2b45f82919a1f400e939

rna.pdb · SHA-256

a06d378d9674295b33b5b0ae4910b72cf20a87adf0bdcfae9592bb13164844ee