3IBK · A

rna_02383__3IBK_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02383__3IBK_1_A
RNA-Solo ID: rna_02383
Split identity: rna_02383
Source structure: 3IBK_1_A
Length: 11 nt
Canonical chains: A
Partition: train

MD-derived metadata

5.48 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 9.98 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AGGGUUAGGGU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

003e0be184738717d86e0a432c91f8d9f4c1748c446a66598f139ad61e925986

rna.gro · SHA-256

8112c5fef4e33def0ec09dd940bffa69e8bf895352feb5d9408805472eefaa6a

rna.pdb · SHA-256

641492b154cda964989cea8ef7a6783f56f37c5ab575c6d289071775c60eb1bb