5MRF · XB

rna_02436__5MRF_1_XB

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02436__5MRF_1_XB
RNA-Solo ID: rna_02436
Split identity: rna_02436
Source structure: 5MRF_1_bb
Length: 76 nt
Canonical chains: XB
Partition: train

MD-derived metadata

6.23 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 24.11 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCUACGUAGCUCAGUUGGUAGAGCACAUCACUCAUAAUGAUGGGGUCACAGGUUCGAAUCCCGUCGUAGCCACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
XB	A	XB	bb

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_02436__5MRF_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

aa3003ce467b9ee5ccf37d60e39eae6bf996a39cab7be18e512cc23a18a5c40a

rna.gro · SHA-256

2ba037a77eb9f140abbff68b7f837011ddce0a6b02347d687840b516b431353a

rna.pdb · SHA-256

92b6b3a5238b3ae0d900499f8f8959736194e8dc314514154e414aeaf52a2aa7