2YKG · B / C

rna_02442__2YKG_1_B-C

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02442__2YKG_1_B-C
RNA-Solo ID: rna_02442
Split identity: rna_02442
Source structure: 2YKG_1_C-D
Length: 20 nt
Canonical chains: B, C
Partition: train

MD-derived metadata

1.29 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 11.75 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCGCGCGCGCGCGCGCGCGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	C
C	C	C	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

769d4b7f4481bacb5ad781df9c0b0dd24ceece1490de889f77a49aa823f51fe9

rna.gro · SHA-256

5d4792bf694f2a4ff76cbb5fc160945b5ae2b11d9a134cc1853412f493efe6b7

rna.pdb · SHA-256

46db7e04bca3393eabc01c116a60fb7a861b0bb9d1bc90ad27b710fb133de776