8EXY · I

rna_02465__8EXY_1_I

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_02465__8EXY_1_I
RNA-Solo ID
rna_02465
Split identity
rna_02465
Source structure
8EXY_1_R
Length
29 nt
Canonical chains
I
Partition
train

MD-derived metadata

3.83 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
15.33 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CCGAAGCUUCGGCUUCGGCAGGAGAGGUA
Canonical chainPDB chainlabel_asym_idauth_asym_id
IIIR

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

cb33876a214585f50fc74e62e41422d65c6f8c16014b87b9fa1002cbb2fb50aa

rna.gro · SHA-256

84d0ee4d1e85a77be9d968869094f933ce44539fdfc6cd7ac774ee5fedc73417

rna.pdb · SHA-256

37b13cd7d1a6979a2cac44e40afd510c9e77e763f63ddbf899c4a2fa51b1ecf7