4V6E · W / X

rna_02489__4V6E_1_W-X

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_02489__4V6E_1_W-X
RNA-Solo ID
rna_02489
Split identity
rna_02489
Source structure
4V6E_1_AX
Length
23 nt
Canonical chains
W, X
Partition
train

MD-derived metadata

2.58 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
12.06 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UUUUUUGGGGAUUGAAAAUCCCC
Canonical chainPDB chainlabel_asym_idauth_asym_id
WWWAW
XXXAX

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

dae42121048a3018545388cc5006dd08393b0065eee710ffee7d25ccef67a60c

rna.gro · SHA-256

eb889826c68917674c9bcb2b668fb807063379971bd38426d31e0e35bf9c4735

rna.pdb · SHA-256

4d531e90a9fa87c7fd885ca175a3c2ddf6e5cbc1d3a7d4b12ee441a7ee7917e7