5VJ9 · C / D

rna_02607__5VJ9_1_C-D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02607__5VJ9_1_C-D
RNA-Solo ID: rna_02607
Split identity: rna_02607
Source structure: 5VJ9_1_C
Length: 32 nt
Canonical chains: C, D
Partition: val

MD-derived metadata

1.53 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 15.38 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCGGGGACGACCCUGCGCGGGGACGACCCUGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	C	C	C
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

c7c22dcdadc66db42b2c2acbf49f8f890d2af82bff048d623079cbddf7094e08

rna.gro · SHA-256

5226e94bd4cc74b590c554c5cce27748af9b1c7c073af2c52e34a5c67fcb382f

rna.pdb · SHA-256

242c921eb88d724363d42348e38640705fc8a81271cc40075a3db9e9d37f08bf