8HKU · B

rna_02780__8HKU_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02780__8HKU_1_B
RNA-Solo ID: rna_02780
Split identity: rna_02780
Source structure: 8HKU_1_A5S
Length: 122 nt
Canonical chains: B
Partition: train

MD-derived metadata

16.02 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 33.18 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGCCCACCCGGUCAUAGUGAGCGGGUAACACCCGGACUCGUUUCGAACCCGGAAGUUAAGCCGCUCACGUCAGAGGGGCCGUGGGAUCCGAGAGGGCCCGCAGCCUCUCUGAGCUGGGAUGG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	A	B	A5S

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_02780__8HKU_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

f7f134dd14d5855a5599bc1e1e7ccde189c6ef52752b6625179561ec59b4842b

rna.gro · SHA-256

24a11abc1b7927f76a4ea25c972b5b755cbf376e793d066b9a79ad1d412bff9b

rna.pdb · SHA-256

e1dca03326451f35e4fb994f29e0f09f3cef27d18ed16ed071e5b0a12300e306