8HKV · B

rna_02780__8HKV_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02780__8HKV_1_B
RNA-Solo ID: rna_02780
Split identity: rna_02780
Source structure: 8HKV_1_A5S
Length: 122 nt
Canonical chains: B
Partition: train

MD-derived metadata

7.06 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.03 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGCCCACCCGGUCAUAGUGAGCGGGUAACACCCGGACUCGUUUCGAACCCGGAAGUUAAGCCGCUCACGUCAGAGGGGCCGUGGGAUCCGAGAGGGCCCGCAGCCUCUCUGAGCUGGGAUGG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	A	B	A5S

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_02780__8HKV_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

052cd0279be9980e349d39ec1c00d6a5265278195aad8633198c24a285422509

rna.gro · SHA-256

af87b870ce4dbf4995e651f6839c995b86df5c8a57e0a63a75d673b320bc3996

rna.pdb · SHA-256

f8a02f5008a088cc9fe86f59ccc720eb06354f9a7299c1bc0a6842004af7a7e5