5B43 · B

rna_02819__5B43_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02819__5B43_1_B
RNA-Solo ID: rna_02819
Split identity: rna_02819
Source structure: 5B43_1_B
Length: 40 nt
Canonical chains: B
Partition: val

MD-derived metadata

14.02 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 29.77 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AAUUUCUACUCUUGUAGAUGGAAAUUAGGUGCGCUUGGCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rg_spike

Inherited warnings: geometry:rg_spike

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

0c9f0e6345838bf6ec256c0b8a2d7bfa9e86accbb46e0c70df11b4e197a21909

rna.gro · SHA-256

57ef3a1d4cf57dbc707b4d8b3a55d242b0827a7f1bece7cd3de804f6b273ae57

rna.pdb · SHA-256

ca10b43192c8bdaa3d7cccba218d14d663f99c60fd1d4878e8a27435d9eb1ad7