402D · A / B

rna_02861__402D_1_A-B

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_02861__402D_1_A-B
RNA-Solo ID
rna_02861
Split identity
rna_02861
Source structure
402D_1_A-B
Length
16 nt
Canonical chains
A, B
Partition
test_flex

MD-derived metadata

1.46 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
10.25 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGCCAGCGCGCCAGCG
Canonical chainPDB chainlabel_asym_idauth_asym_id
AAAA
BBBB

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

7d45fba57b8b14778cd2377dcfdcfeb4250d7af4c830ed3d0a504bbf9f0663f9

rna.gro · SHA-256

3bc33c2e63c1271587dcd39a1ea3477d88beb7f1a0b766ba3a99f5bbaf302798

rna.pdb · SHA-256

4076c7fa84808662f24663e8b29828bea81f164a521a35fe308ed8e113e7ede9