8HD6 · A

rna_02884__8HD6_1_A

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02884__8HD6_1_A
RNA-Solo ID: rna_02884
Split identity: rna_02884
Source structure: 8HD6_1_N
Length: 419 nt
Canonical chains: A
Partition: test_flex

MD-derived metadata

7.73 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 42.46 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CUCUCUAAAUAGCAAUAUUUACCUUUGGAGGGAAAAGUUAUCAGGCAUGCACCUGGUAGCUAGUCUUUAAACCAAUAGAUUGCAUCGGUUUAAAAGGCAAGACCGUCAAAUUGCGGGAAAGGGGUCAACAGCCGUUCAGUACCAAGUCUCAGGGGAAACUUUGAGAUGGCCUUGCAAAGGGUAUGGUAAUAAGCUGACGGACAUGGUCCUAACCACGCAGCCAAGUCCUAAGUCAACAGAUCUUCUGUUGAUAUGGAUGCAGUUCACAAACUAAAUGUCGGUCGGGGAAGAUGUAUUCUUCUCAUAAGAUAUAGUCGGACCUCUCCUUAAUGGGAGCUAGCGGAUGAAGUGAUGCAACACUGGAGCCGCUGGGAACUAAUUUGUAUGCGAAAGUAUAUUGAUUAGUUUUGGAGUACUCG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	N

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

40e07881c4b4d0c2bc0dd3f34c377d839efd2c035f89590392cedf78302565ea

rna.gro · SHA-256

dd3096663f7f6bf3c52ca518ac797f150ce16dc1b75c720f6a5ca068dec0da63

rna.pdb · SHA-256

ed8735ae890d1d123f19e8cb94685feb05dd21c33a9d18ac16a2558956988f68