5M5X · O

rna_02892__5M5X_1_O

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02892__5M5X_1_O
RNA-Solo ID: rna_02892
Split identity: rna_02892
Source structure: 5M5X_1_R
Length: 13 nt
Canonical chains: O
Partition: train

MD-derived metadata

6.60 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 13.54 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AUAAAGACCAGGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
O	O	O	R

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

8c8fb8007af59e2fa781df14d9280d418caf232e11352f51724e0e3ba4a9b366

rna.gro · SHA-256

57d69d7c08c90219d6f00e19d677cc31ff35b4f93740a5c4f2841bc66b137f75

rna.pdb · SHA-256

d4debc10032ab02ad3815d98a79c1a9d0bf6e00d13d8efcc305f12e1e234aab8