3HM9 · C

rna_02908__3HM9_1_C

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02908__3HM9_1_C
RNA-Solo ID: rna_02908
Split identity: rna_02908
Source structure: 3HM9_1_Y
Length: 13 nt
Canonical chains: C
Partition: train

MD-derived metadata

8.06 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 13.20 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AACCUACUACCUC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	C	C	Y

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

6b12b42b9467fe746046227ff2b2d8416829fed73d03846bf8a715f9e6249b77

rna.gro · SHA-256

44253bc1b52123c833e1ce91886a944f84b8eb3545ddd9cc932bc46b58ad0d2b

rna.pdb · SHA-256

d3e9848cee767be8c6b78a2d02159a549c39cf628b0e9786aee68389f1b147da