8APO · DD

rna_02932__8APO_1_DD

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02932__8APO_1_DD
RNA-Solo ID: rna_02932
Split identity: rna_02932
Source structure: 8APO_1_C1
Length: 23 nt
Canonical chains: DD
Partition: train

MD-derived metadata

2.74 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 12.56 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AGCACUGGUUUCAUAAGCCAGCU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
DD	A	DD	C1

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

rna_02932__8APO_1_A

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

367b40e073ff9bca0ab431858fb8d9b3cf9d2bab2ef61087e88fe49b1e259719

rna.gro · SHA-256

78b10bc0a6332bf77442b356d3bc002e404211408074ed824d668d4b545d88f2

rna.pdb · SHA-256

dedebf36b8967a4a1e0b4a6354b7e3894fb4ce68a53f977ec1d572675c52991b