8DEX · L

rna_02947__8DEX_1_L

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_02947__8DEX_1_L
RNA-Solo ID: rna_02947
Split identity: rna_02947
Source structure: 8DEX_1_L
Length: 48 nt
Canonical chains: L
Partition: val

MD-derived metadata

19.49 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 33.12 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGAUUGAAACGCCAUGCUCAGGCUGGCGAGUGCGCGCCACUCAUCAAG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
L	L	L	L

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

a68618d9e36fc579d54256abf858b1f300f5db2b6acc40ee34538b2ca729860a

rna.gro · SHA-256

23c908e6944dee46ca490745f436106f7b8db24fd1a6db7a02d10a6dda3ac1c8

rna.pdb · SHA-256

6627c64374aae4a05a43a44d11b35ccc5c1218faf1e81830c463bce52de0e5ff