3VJR · B / D

rna_03006__3VJR_1_B-D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03006__3VJR_1_B-D
RNA-Solo ID: rna_03006
Split identity: rna_03006
Source structure: 3VJR_1_B
Length: 72 nt
Canonical chains: B, D
Partition: train

MD-derived metadata

3.70 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 27.10 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGGGCUAAGCGGUUCGAUCCCGCUUAGCUCCACCAGGGGGCUAAGCGGUUCGAUCCCGCUUAGCUCCACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

3964c8ce13e300398fd6ff74cfe6ad5dbe9898f604a5a70e2836de4890343472

rna.gro · SHA-256

ef7874b874285f0e3f858fd470093418bfdd4c93a377c33752d08f65614eee04

rna.pdb · SHA-256

33c0178b424bbc65d5ef78b5e52a73237dc4192c4de08bd24bba86b8d1991e1e