3VJR · D

rna_03006__3VJR_1_D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03006__3VJR_1_D
RNA-Solo ID: rna_03006
Split identity: rna_03006
Source structure: 3VJR_1_D
Length: 36 nt
Canonical chains: D
Partition: train

MD-derived metadata

3.22 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 16.88 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGGGGCUAAGCGGUUCGAUCCCGCUUAGCUCCACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

3902c6472f505c23851d676cd9255a9fad282c5a97b47ac7987ca3304f197b6f

rna.gro · SHA-256

71f2c8128eb89f50f2944b01d7f8d203df8fdb572c137a6a02cea0a43b222a14

rna.pdb · SHA-256

d04d088974e75de9b670767aa246d6a9b313cd410c03ae25cd317e2e0c59c4a0