3KS8 · A / B

rna_03121__3KS8_1_A-B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03121__3KS8_1_A-B
RNA-Solo ID: rna_03121
Split identity: rna_03121
Source structure: 3KS8_1_E-F
Length: 36 nt
Canonical chains: A, B
Partition: train

MD-derived metadata

1.96 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 16.74 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

AGAAGGAGGGAGGGAGGAUCCUCCCUCCCUCCUUCU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	E
B	B	B	F

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

46a4e8b666df11190ebec0b7c1738029b514570a20f14b040a0e4702f2f8badc

rna.gro · SHA-256

acd46d989b69f84eb0d699854d3c47bfa5825fb95f3d90e1c97e58e23a982217

rna.pdb · SHA-256

47f1daad7c1a988f151802cc0b5e9d4fd5d091517da8fccbf99a4a5184fa1ef5