5BKN · S / IA

rna_03245__5BKN_1_IA-S

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03245__5BKN_1_IA-S
RNA-Solo ID: rna_03245
Split identity: rna_03245
Source structure: 5BKN_1_V-WW
Length: 16 nt
Canonical chains: S, IA
Partition: train

MD-derived metadata

3.66 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 12.07 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

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Canonical chain	PDB chain	label_asym_id	auth_asym_id
S	S	S	V
IA	A	IA	WW

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

5b932b1dd4a78bb629c7be6f7da4b6ccdb084e7c59f201b3389ba61b51991288

rna.gro · SHA-256

6a2585e56333662828bc90fd46a53926328e5bcb2a8ec20d5bdf2a04b1ba49d1

rna.pdb · SHA-256

25b0a73111a7d26a3fb5b685773bcd9bd6bb6854429cb454f878a5bf5a11f20f