3IVK · E

rna_03289__3IVK_1_E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03289__3IVK_1_E
RNA-Solo ID: rna_03289
Split identity: rna_03289
Source structure: 3IVK_1_M
Length: 128 nt
Canonical chains: E
Partition: train

MD-derived metadata

3.11 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 24.84 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UCCAGUAGGAACACUAUACUACUGGAUAAUCAAAGACAAAUCUGCCCGAAGGGCUUGAGAACAUCGAAACACGAUGCAGAGGUGGCAGCCUCCGGUGGGUUAAAACCCAACGUUCUCAACAAUAGUGA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
E	E	E	M

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

90227d5df1debdfb1554520d3369c54ce0aee9854d7181f98e94e3214b1eb820

rna.gro · SHA-256

95f85f8f6f18c09d1a1314490aa2dd8e9d0e8fd6f3b526e6002c6b506379a649

rna.pdb · SHA-256

b08eda58b5cf52802f9bb78f9707624faa2e7000ccb71452904217ef6100ad31