3J81 · JA

rna_03312__3J81_1_JA

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03312__3J81_1_JA
RNA-Solo ID: rna_03312
Split identity: rna_03312
Source structure: 3J81_1_1
Length: 74 nt
Canonical chains: JA
Partition: train

MD-derived metadata

4.69 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.56 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCGCCGUGGCGCAGUGGAAGCGCGCAGGUCUCAUAAACCUGAUGUCCUCGGAUCGAAACCGAGCGGCGCUACCA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
JA	A	JA	1

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

21b89c4e2fe13b0efcc9ccfb58d4bae7021831c5a7a35166a6edcacac77c6bc4

rna.gro · SHA-256

56bd5d792104743bdf7912d81107e32c2fdf40554b61991d156097a9a6f9b202

rna.pdb · SHA-256

92d9e49a3126f58a9a59eab9c8fc3f626819a729650b1af0a320937f96f820fa