8BD5 · B

rna_03332__8BD5_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03332__8BD5_1_B
RNA-Solo ID: rna_03332
Split identity: rna_03332
Source structure: 8BD5_1_B
Length: 246 nt
Canonical chains: B
Partition: train

MD-derived metadata

9.61 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 37.39 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UAAUAGCGCCGCAAUUCAUGCUGCUUGCAGCCUCUGAAUUUUGUUAAAUGAGGGUUAGUUUGACUGUAUAAAUACAGUCUUGCUUUCUGACCCUGGUAGCUGCUCACCCUGAUGCUGCUGUCAAUAGACAGGAUAGGUGCGCUCCCAGCAAUAAGGGCGCGGAUGUACUGCUGUAGUGGCUACUGAAUCACCCCCGAUCAAGGGGGAACCCUAAAUGGGUUGAAAGGAGAAGUCAUUUAAUAAGGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

9020efc2b25393a8d35e5e7ac873e5dc6f3c1aee626a00240a0e8ad2df1eee13

rna.gro · SHA-256

34d081ece7f0336f64b7158a99937aab9bfdb38bbb87fe289b68912c36fe8501

rna.pdb · SHA-256

9362977681686b11bfeb91ee2f083d04edbea5ef396a18ebec61196bd4ba9ddc