5G4V · A / E / F

rna_03352__5G4V_1_A-E-F

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03352__5G4V_1_A-E-F
RNA-Solo ID: rna_03352
Split identity: rna_03352
Source structure: 5G4V_1_E-F
Length: 57 nt
Canonical chains: A, E, F
Partition: val

MD-derived metadata

6.81 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.62 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCGAAGAGCCGGCGAGCCGGCGAAGAGCCGGCGAGCCGGCGAAGAGCCGGCGAGCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
A	A	A	A
E	E	E	E
F	F	F	F

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

94889520ffb635d6fdc0dbfa13d6f19cffc5ba7169f10347a5adf625cc1fd687

rna.gro · SHA-256

28386eaefde108f922db00623d232ce2e2f8e17418f9668d5abfeb379d380352

rna.pdb · SHA-256

72bc0b2078f091164813c1d615a76170276ae30ee3e3634368e31b43ccf8e290