5XY3 · B

rna_03366__5XY3_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03366__5XY3_1_B
RNA-Solo ID: rna_03366
Split identity: rna_03366
Source structure: 5XY3_1_3
Length: 117 nt
Canonical chains: B
Partition: train

MD-derived metadata

7.46 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.52 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GAAGCGGCCACACCCGGCUGGCAACAUCCAGCUCCACUCCGAACCUGGAAAUUAAGCAGUCGCGGGCCACAUCAGUACUGGGCUGGGCGACUUCCCGGGAACGUGCGGUGCUUGCUU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	3

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

320b384bbfc505800e461b3b42b15b236dacc8f2d44b937acc1b0811a05d93b0

rna.gro · SHA-256

26e34be4d6dd5c1e84d403fada2e50e49f0be562dc34fc9e18d3633e598800e1

rna.pdb · SHA-256

2c4c6273608e53b84d08f87a812d5c144e5667aea2886eabee1c52dded155626