8EJ3 · H

rna_03425__8EJ3_1_H

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03425__8EJ3_1_H
RNA-Solo ID: rna_03425
Split identity: rna_03425
Source structure: 8EJ3_1_R
Length: 17 nt
Canonical chains: H
Partition: train

MD-derived metadata

17.46 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 13.15 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CUUCGGCAGGAGAGGUA

Canonical chain	PDB chain	label_asym_id	auth_asym_id
H	H	H	R

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

4b35b7bf14938b69ac1dccc81b0e7c5f3a0ce352d83ccea9cc01d8cda98e1871

rna.gro · SHA-256

20e0542b88fa8a0fdd6a7ad125d4d9efbd23a4b72390030476ef2f79959ec5ff

rna.pdb · SHA-256

a0483d58d46de8f67006eaade0814ce94df919574714bb1a9547f81ad1bfbfee