3TUP · B

rna_03462__3TUP_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03462__3TUP_1_B
RNA-Solo ID: rna_03462
Split identity: rna_03462
Source structure: 3TUP_1_T
Length: 74 nt
Canonical chains: B
Partition: train

MD-derived metadata

2.91 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 22.87 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCCGAGGUAGCUCAGUUGGUAGAGCAUGCGACUGAAAAUCGCAGUGUCGGCGGUUCGAUUCUGCUCCUCGGCAC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	T

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

a911dd646dd692a6813c5a9c44f7dc7affda2588e85eb1ec3887a09c465863b2

rna.gro · SHA-256

e4103a3cf6945cc3a8b3097e026d8fb840b49766016e66cc4a421d515378b18d

rna.pdb · SHA-256

4af36e87f1413ca82a7a5da5a1c25a2be56617e412e99a087c36f80fce0c8e6a