8DFO · L

rna_03531__8DFO_1_L

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03531__8DFO_1_L
RNA-Solo ID: rna_03531
Split identity: rna_03531
Source structure: 8DFO_1_L
Length: 45 nt
Canonical chains: L
Partition: val

MD-derived metadata

20.63 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 34.34 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGAUUGAAACGCCAUGCUCAGGCUGGCGAGUGCGCGCCACUCAUC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
L	L	L	L

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: geometry:rmsd_high

Inherited warnings: geometry:rmsd_high

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

ce0bb5ceaf0ab1d96663927993a3ce91ab125655725d985af9290686e752e3a2

rna.gro · SHA-256

0942a566bf3c41c5c09a9276bd9cbddcfeabb538aa2627cff3aae77f8fe7c572

rna.pdb · SHA-256

d3ee7d3dd55f55299696d4bf6fabbdeae3c9cd3d3d5e28289f1db6ffebdde868