5XZ1 · C / D

rna_03542__5XZ1_1_C-D

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03542__5XZ1_1_C-D
RNA-Solo ID: rna_03542
Split identity: rna_03542
Source structure: 5XZ1_1_C-D
Length: 44 nt
Canonical chains: C, D
Partition: train

MD-derived metadata

3.64 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 19.12 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

UGCGUCGCUCCGGAAAAGUCGCUGCGUCGCUCCGGAAAAGUCGC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
C	C	C	C
D	D	D	D

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

1c6097ea19500f9af3231f22cde836bf45bde9ed2754a94bb087895be7b664aa

rna.gro · SHA-256

73b297cb03c54a2d6b537b0f62786093e3f362631479145b962f1819a0203f70

rna.pdb · SHA-256

bdc420d0435b68ce9cf224ddc9d3e9432a4476cca144b839d5c901eb85f0734e