4V5H · V

rna_03560__4V5H_1_V

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_03560__4V5H_1_V
RNA-Solo ID
rna_03560
Split identity
rna_03560
Source structure
4V5H_1_AV
Length
77 nt
Canonical chains
V
Partition
train

MD-derived metadata

4.23 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
23.09 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CGGCACGUAGCGCAGCCUGGUAGCGCACCGUCAUGGGGUGUCGGGGGUCGGAGGUUCAAAUCCUCUCGUGCCGACCA
Canonical chainPDB chainlabel_asym_idauth_asym_id
VVVAV

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

1dfd25400d0d06ae315f39933a0d59c023a4e21f8450d35b26c13cde8a551c9c

rna.gro · SHA-256

82bf1e934e266323ce03af39f3d1f7e2b20f4647b9352dd2579820f36bfbcb98

rna.pdb · SHA-256

1fc558d915c7cb3d4fa4f34dc579662c43e52d3d98dc2010e2dfe58b853ebca2