7ED5 · E / F

rna_03563__7ED5_1_E-F

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_03563__7ED5_1_E-F
RNA-Solo ID
rna_03563
Split identity
rna_03563
Source structure
7ED5_1_J-I
Length
44 nt
Canonical chains
E, F
Partition
train

MD-derived metadata

3.34 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
19.34 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GCUAUGUGAGAUUAAGUUAUCCCCAUAACUUAAUCUCACAUAGC
Canonical chainPDB chainlabel_asym_idauth_asym_id
EEEI
FFFJ

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

478217524d67c3f3975865e6d67b392ac9912ccb92d2c2ca4672fc968f56bc31

rna.gro · SHA-256

3b5d5e494d0e046ac1ff61b166c397630695311ea1841b370f214d5694ff5815

rna.pdb · SHA-256

b761fb0f22d18569c5b735869a1918a193c1536e0a7c15553d7210a515d59208