5CD1 · F

rna_03629__5CD1_1_F

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03629__5CD1_1_F
RNA-Solo ID: rna_03629
Split identity: rna_03629
Source structure: 5CD1_1_N
Length: 76 nt
Canonical chains: F
Partition: train

MD-derived metadata

9.45 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 23.99 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GGCCCGGAUAGCUCAGUCGGUAGAGCAUCAGACUUUUAAUCUGAGGGUCCAGGGUUCAAGUCCCUGUUCGGGCGCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
F	F	F	N

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

9ac2971cdeea7c7dac10cce054c27e5c0a516fb72b123a06dedbb801bc92308f

rna.gro · SHA-256

7d6c89b97b76e7b231a94946d18fdecf2515e72687db7643794fe05a0260e931

rna.pdb · SHA-256

a37b0738384617802450121b117bd15e36246cc5a978ee0915135ca37a6775f6