8DO6 · D / E

rna_03688__8DO6_1_D-E

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03688__8DO6_1_D-E
RNA-Solo ID: rna_03688
Split identity: rna_03688
Source structure: 8DO6_1_I-J
Length: 61 nt
Canonical chains: D, E
Partition: train

MD-derived metadata

16.46 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 27.31 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

ACGAGAACACGUAUGCCGAAGUAUAUAAAUCAUCAGAUGAUUUAUAUACUUCGGCAUACGU

Canonical chain	PDB chain	label_asym_id	auth_asym_id
D	D	D	I
E	E	E	J

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

320a7df023a824ee2cca2dc0eecf1d69d149f538be67bf3296d55e7828b0f1b3

rna.gro · SHA-256

34872494ed87c986dc5f97baf0851bc8381b3d4975cf3978de0cac728c5f1f18

rna.pdb · SHA-256

07cfcb0623a008e0bfb93128fa9489474381c74790d6061a3f478ba74eb93487