3ADI · D / E

rna_03752__3ADI_1_D-E

Coming soon
Source PDB ↗

Sample identity

Trajectory ID
rna_03752__3ADI_1_D-E
RNA-Solo ID
rna_03752
Split identity
rna_03752
Source structure
3ADI_1_D-E
Length
20 nt
Canonical chains
D, E
Partition
train

MD-derived metadata

1.56 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration
11.62 Å · heavy atoms
Frames
1,001 · 0–100 ns
Coordinate status
pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CUCGAUAACCGGUUAUCGAG
Canonical chainPDB chainlabel_asym_idauth_asym_id
DDDD
EEEE

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

FileContentsAvailability
rna.xtcRNA-only coordinates · 1,001 framesComing soon
rna.groMatching initial coordinates / topologyComing soon
rna.pdbMatching initial structure with PDB chain mappingComing soon
rna.xtc · SHA-256

e05195cc8f51279bf35710d8ad52501fa887931b20ca5b308b7582394e882949

rna.gro · SHA-256

1fa7747e8172abb3e8f39b6d34ab2b8b5ff4ec4c9c673b252c3857308df34013

rna.pdb · SHA-256

9bf98f1430a9a82cdaceb73f2e120c682c69d560a9aa5252889a3fd476ea4480