4J39 · B

rna_03849__4J39_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03849__4J39_1_B
RNA-Solo ID: rna_03849
Split identity: rna_03849
Source structure: 4J39_1_B
Length: 19 nt
Canonical chains: B
Partition: train

MD-derived metadata

8.19 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 18.77 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

CAGCAGCAGCCUGCUGCUG

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

f3eac118e9537a12da4b940f2b4519e6af7287ab2cc8a4c170df9804dd3c5f9e

rna.gro · SHA-256

9a8a3c6d0a5b18cfb4e2464cb46ee26e1aaf1bd55a529bbe50e8768fd31c158e

rna.pdb · SHA-256

8720012f1152bcb20bf093e5c9dcab2444789e103f3bee9c726f97640c171f22