4PY5 · B

rna_03874__4PY5_1_B

Coming soon

Source PDB ↗

Sample identity

Trajectory ID: rna_03874__4PY5_1_B
RNA-Solo ID: rna_03874
Split identity: rna_03874
Source structure: 4PY5_1_B
Length: 19 nt
Canonical chains: B
Partition: train

MD-derived metadata

9.71 Å

Median heavy-atom RMSD to frame 0, without an additional fit.

Mean radius of gyration: 17.96 Å · heavy atoms
Frames: 1,001 · 0–100 ns
Coordinate status: pass

These are MD statistics, not RNADynNet predictions. Calculation details

Structure & trajectory preview

Interactive trajectory preview, per-residue RMSF and NMC: Coming soon.

The original experimental source structure and the matching MD initial structure are different artifacts. Use the release GRO/PDB with its XTC; do not substitute the source PDB.

Sequence & chain mapping

GAGUGCGACACCUGAUUCC

Canonical chain	PDB chain	label_asym_id	auth_asym_id
B	B	B	B

Residue-level mapping and atom ranges will accompany the trajectory package.

Quality information

Current warnings: None recorded in this field.

Inherited warnings: None recorded in this field.

A coordinate check pass does not establish equilibrium or convergence. Diagnostic flags are retained; they are not automatic exclusion labels.

Historical aliases

No alternate ID recorded.

Files & integrity

RNADynBench-v0.1-revision-20260920-x0

File	Contents	Availability
rna.xtc	RNA-only coordinates · 1,001 frames	Coming soon
rna.gro	Matching initial coordinates / topology	Coming soon
rna.pdb	Matching initial structure with PDB chain mapping	Coming soon

rna.xtc · SHA-256

b923e862910c51840d97d96132f81bb41b4e87d4a64ca32d048fa694ef213dab

rna.gro · SHA-256

e102e9aeaeb3b236f304d4eeaf8629ff5639048ece5d28ecd426c2d6a4151ab4

rna.pdb · SHA-256

70b07aa940d67e3e8328fcbf482a8e6f8a56bb56db48b7f0c55e3a2509bdefc0